44.
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Allelochemicals of the phenoxazinone class act at physiologically relevant concentrations
Venturelli S., Petersen S., Langenecker T., Weigel D., Lauer U. M. and Becker C.
Plant Signal Behav
(2016),
11(5) e1176818.

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43.
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Epigenome confrontation triggers immediate reprogramming of DNA methylation and transposon silencing in Arabidopsis thaliana F1 epihybrids
Rigal M., Becker C., Pelissier T., Pogorelcnik R., Devos J., Ikeda Y., Weigel D. and Mathieu O.
Proc Natl Acad Sci U S A
(2016),
113(14) 2083-92.

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42.
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Plants Release Precursors of Histone Deacetylase Inhibitors to Suppress Growth of Competitors
Venturelli S., Belz R. G., Kamper A., Berger A., von Horn K., Wegner A., Bocker A., Zabulon G., Langenecker T., Kohlbacher O., Barneche F., Weigel D., Lauer U. M., Bitzer M. and Becker C.
Plant Cell
(2015),
27(11) 3175-89.

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41.
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KH domain protein RCF3 is a tissue-biased regulator of the plant miRNA biogenesis cofactor HYL1
Karlsson P., Christie M. D., Seymour D. K., Wang H., Wang X., Hagmann J., Kulcheski F. and Manavella P. A.
Proc Natl Acad Sci U S A
(2015),
112(45) 14096-101.

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40.
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Chromatin in 3D: progress and prospects for plants
Liu C. and Weigel D.
Genome Biol
(2015),
16(1) 170.

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39.
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THO2, a core member of the THO/TREX complex, is required for microRNA production in Arabidopsis
Francisco-Mangilet A. G., Karlsson P., Kim M. H., Eo H. J., Oh S. A., Kim J. H., Kulcheski F. R., Park S. K. and Manavella P. A.
Plant J
(2015),
82(6) 1018-29.

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38.
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Century-scale methylome stability in a recently diverged Arabidopsis thaliana lineage
Hagmann J., Becker C., Muller J., Stegle O., Meyer R. C., Wang G., Schneeberger K., Fitz J., Altmann T., Bergelson J., Borgwardt K. and Weigel D.
PLoS Genet
(2015),
11(1) e1004920.

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37.
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Genome-wide analysis of local chromatin packing in Arabidopsis thaliana
Wang C., Liu C., Roqueiro D., Grimm D., Schwab R., Becker C., Lanz C. and Weigel D.
Genome Res
(2015),
25(2) 246-56.

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36.
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Rapid divergence and high diversity of miRNAs and miRNA targets in the Camelineae
Smith L. M., Burbano H. A., Wang X., Fitz J., Wang G., Ural-Blimke Y. and Weigel D.
Plant J
(2015),
81(4) 597-610.

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35.
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Evolution of DNA methylation patterns in the Brassicaceae is driven by differences in genome organization
Seymour D. K., Koenig D., Hagmann J., Becker C. and Weigel D.
PLoS Genet
(2014),
10(11) e1004785.

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34.
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Temporal Control of Leaf Complexity by miRNA-Regulated Licensing of Protein Complexes
Rubio-Somoza I., Zhou C. M., Confraria A., Martinho C., von Born P., Baena-Gonzalez E., Wang J. W. and Weigel D.
Curr Biol
(2014),
24(22) 2714-9.

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33.
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Artificial microRNAs for specific gene silencing in rice
Warthmann N., Ossowski S., Schwab R. and Weigel D.
Methods Mol Biol
(2013),
956 131-49.

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32.
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Coordination of flower maturation by a regulatory circuit of three microRNAs
Rubio-Somoza I. and Weigel D.
PLoS Genet
(2013),
9(3) e1003374.

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31.
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Tissue-specific silencing of Arabidopsis SU(VAR)3-9 HOMOLOG8 by miR171a
Manavella P. A., Koenig D., Rubio-Somoza I., Burbano H. A., Becker C. and Weigel D.
Plant Physiol
(2013),
161(2) 805-12.

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30.
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Transposon variants and their effects on gene expression in Arabidopsis
Wang X., Weigel D. and Smith L. M.
PLoS Genet
(2013),
9(2) e1003255.

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29.
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Epialleles in plant evolution
Weigel D. and Colot V.
Genome Biol
(2012),
13(10) 249.

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28.
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Epigenetic variation: origin and transgenerational inheritance
Becker C. and Weigel D.
Curr Opin Plant Biol
(2012),
15(5) 562-7.

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27.
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Fast-forward genetics identifies plant CPL phosphatases as regulators of miRNA processing factor HYL1
Manavella P. A., Hagmann J., Ott F., Laubinger S., Franz M., Macek B. and Weigel D.
Cell
(2012),
151(4) 859-70.

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26.
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MIGS: miRNA-induced gene silencing
Felippes F. F., Wang J. W. and Weigel D.
Plant J
(2012),
70(3) 541-7.

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25.
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Plant secondary siRNA production determined by microRNA-duplex structure
Manavella P. A., Koenig D. and Weigel D.
Proc Natl Acad Sci U S A
(2012),
109(7) 2461-6.

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24.
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Comparative analysis of non-autonomous effects of tasiRNAs and miRNAs in Arabidopsis thaliana
de Felippes F. F., Ott F. and Weigel D.
Nucleic Acids Res
(2011),
39(7) 2880-9.

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23.
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MicroRNA networks and developmental plasticity in plants
Rubio-Somoza I. and Weigel D.
Trends Plant Sci
(2011),
16(5) 258-64.

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22.
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miRNA control of vegetative phase change in trees
Wang J. W., Park M. Y., Wang L. J., Koo Y., Chen X. Y., Weigel D. and Poethig R. S.
PLoS Genet
(2011),
7(2) e1002012.

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21.
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Negative regulation of anthocyanin biosynthesis in Arabidopsis by a miR156-targeted SPL transcription factor
Gou J. Y., Felippes F. F., Liu C. J., Weigel D. and Wang J. W.
Plant Cell
(2011),
23(4) 1512-22.

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20.
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Spontaneous epigenetic variation in the Arabidopsis thaliana methylome
Becker C., Hagmann J., Muller J., Koenig D., Stegle O., Borgwardt K. and Weigel D.
Nature
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480(7376) 245-9.

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19.
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A collection of target mimics for comprehensive analysis of microRNA function in Arabidopsis thaliana
Todesco M., Rubio-Somoza I., Paz-Ares J. and Weigel D.
PLoS Genet
(2010),
6(7) e1001031.

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18.
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Global effects of the small RNA biogenesis machinery on the Arabidopsis thaliana transcriptome
Laubinger S., Zeller G., Henz S. R., Buechel S., Sachsenberg T., Wang J. W., Ratsch G. and Weigel D.
Proc Natl Acad Sci U S A
(2010),
107(41) 17466-73.

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17.
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On reconciling the interactions between APETALA2, miR172 and AGAMOUS with the ABC model of flower development
Wollmann H., Mica E., Todesco M., Long J. A. and Weigel D.
Development
(2010),
137(21) 3633-42.

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16.
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Small RNAs in flower development
Wollmann H. and Weigel D.
Eur J Cell Biol
(2010),
89(2-3) 250-7.

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15.
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Structure determinants for accurate processing of miR172a in Arabidopsis thaliana
Werner S., Wollmann H., Schneeberger K. and Weigel D.
Curr Biol
(2010),
20(1) 42-8.

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14.
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miR156-regulated SPL transcription factors define an endogenous flowering pathway in Arabidopsis thaliana
Wang J. W., Czech B. and Weigel D.
Cell
(2009),
138(4) 738-49.

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13.
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Regulation and functional specialization of small RNA-target nodes during plant development
Rubio-Somoza I., Cuperus J. T., Weigel D. and Carrington J. C.
Curr Opin Plant Biol
(2009),
12(5) 622-7.

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12.
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Triggering the formation of tasiRNAs in Arabidopsis thaliana: the role of microRNA miR173
Felippes F. F. and Weigel D.
EMBO Rep
(2009),
10(3) 264-70.

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11.
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Control of jasmonate biosynthesis and senescence by miR319 targets
Schommer C., Palatnik J. F., Aggarwal P., Chetelat A., Cubas P., Farmer E. E., Nath U. and Weigel D.
PLoS Biol
(2008),
6(9) e230.

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10.
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Dual effects of miR156-targeted SPL genes and CYP78A5/KLUH on plastochron length and organ size in Arabidopsis thaliana
Wang J. W., Schwab R., Czech B., Mica E. and Weigel D.
Plant Cell
(2008),
20(5) 1231-43.

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9.
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Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana
Laubinger S., Sachsenberg T., Zeller G., Busch W., Lohmann J. U., Ratsch G. and Weigel D.
Proc Natl Acad Sci U S A
(2008),
105(25) 8795-800.

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8.
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Evolution of Arabidopsis thaliana microRNAs from random sequences
Felippes F. F., Schneeberger K., Dezulian T., Huson D. H. and Weigel D.
RNA
(2008),
14(12) 2455-9.

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7.
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Gene silencing in plants using artificial microRNAs and other small RNAs
Ossowski S., Schwab R. and Weigel D.
Plant J
(2008),
53(4) 674-90.

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6.
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Highly specific gene silencing by artificial miRNAs in rice
Warthmann N., Chen H., Ossowski S., Weigel D. and Herve P.
PLoS One
(2008),
3(3) e1829.

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5.
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Sequence and expression differences underlie functional specialization of Arabidopsis microRNAs miR159 and miR319
Palatnik J. F., Wollmann H., Schommer C., Schwab R., Boisbouvier J., Rodriguez R., Warthmann N., Allen E., Dezulian T., Huson D., Carrington J. C. and Weigel D.
Dev Cell
(2007),
13(1) 115-25.

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4.
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Target mimicry provides a new mechanism for regulation of microRNA activity
Franco-Zorrilla J. M., Valli A., Todesco M., Mateos I., Puga M. I., Rubio-Somoza I., Leyva A., Weigel D., Garcia J. A. and Paz-Ares J.
Nat Genet
(2007),
39(8) 1033-7.

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3.
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Highly specific gene silencing by artificial microRNAs in Arabidopsis
Schwab R., Ossowski S., Riester M., Warthmann N. and Weigel D.
Plant Cell
(2006),
18(5) 1121-33.

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2.
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Specific effects of microRNAs on the plant transcriptome
Schwab R., Palatnik J. F., Riester M., Schommer C., Schmid M. and Weigel D.
Dev Cell
(2005),
8(4) 517-27.

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1.
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Control of leaf morphogenesis by microRNAs
Palatnik J. F., Allen E., Wu X., Schommer C., Schwab R., Carrington J. C. and Weigel D.
Nature
(2003),
425(6955) 257-63.

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