Collaborative paper: Methylome and apple fruit development

High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development

Daccord et al.

Nature Genetics (2017) doi:10.1038/ng.3886

Using the latest sequencing and optical mapping technologies, we have produced a high-quality de novo assembly of the

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Biennial department retreat Bad Urach

We spent May 18-19 in Bad Urach

A great two days in Bad Urach, discussing not only exciting science, but also how we can improve ourselves as scientists, both individually and as a team.

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With Mathieu lab: TE-related plant proteins in gene silencing

Arabidopsis proteins with a transposon-related domain act in gene silencing

Latest paper: Arabidopsis proteins with a transposon-related domain act in gene silencing

Yoko Ikeda, Thierry Pélissier, Pierre Bourguet, Claude Becker, Marie-Noëlle Pouch-Pélissier, Romain Pogorelcnik, Magdalena Weingartner, Detlef Weigel, Jean-Marc Deragon

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RNA helicases and hybrid breakdown in A. thaliana

Chlorosis caused by two recessively interacting genes reveals a role of RNA helicase in hybrid breakdown in Arabidopsis thaliana

Björn Plötner, Markus Nurmi, Axel Fischer, Mutsumi Watanabe, Korbinian Schneeberger, Svante Holm, Neha Vaid, Mark Aurel Schöttler, Dirk Walther, Rainer Hoefgen,

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Sediment DNA revolutionizing ancient genetics

Neandertal and Denisovan DNA from Pleistocene sediments

Targeted enrichment of sediment DNA revolutionizing ancient genetics

Viviane Slon, Charlotte Hopfe, Clemens L. Weiß, Hernán A. Burbano, Svante Pääbo, Matthias Meyer

Although a rich record of Pleistocene human-associated archaeological assemblages exists, the … Read the rest

March for Science Tübingen

Great turnout — 2700 marched in Tübingen

Article (in German) in our local newspaper

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Dangerous Mix NLR proteins in autoimmunity: higher order complexes

Activation of a Plant NLR Complex through Heteromeric Association with an Autoimmune Risk Variant of Another NLR

Tran, D.T.N., Chung, E.H., Habring-Müller, A., Demar, M., Schwab, R., Dangl, J.L., Weigel, D., Chae, E.

When independently evolved immune receptor variants meet … Read the rest

Awesome collaborators collecting microbe field samples!

Many thanks to Joy Bergelson, Ben Brachi, Svante Holm, Magnus Nordborg et al.

The Bergelson, Dean, Holm and Nordborg labs are regularly sampling Arabidopsis thaliana field sites in Sweden. Many thanks for their efforts to collect microbial samples, which we … Read the rest

Join us as a postdoc in Computational Genomics

A post-doctoral position is available in the area of comparative genome annotation

More information and the full ad is here.… Read the rest

Moi’s paper on adaptation to climate change on bioRxiv

Genomic basis and evolutionary potential for extreme drought adaptation in Arabidopsis thaliana

On the potential of Arabidopsis to adapt in situ to #climatechange (with many helpers)

Expósito Alonso, M., Vasseur, F., Ding, W., Wang, G., Burbano, H. A., Weigel, D.Read the rest

Congrats Karsten Borgwardt – Full Professor ETH

We congratulate former WeigelWorld member Karsten Borgwardt

Prof. Dr. Karsten M. Borgwardt (*1980), currently Associate Professor at ETH Zurich, has been appointed as Full Professor of Data Mining at ETH. Karsten is a highly renowned scientist who works on one … Read the rest

March for Science – Earth Day April 22

Around the world – and also in Tübingen.

For more information: https://www.facebook.com/ScienceMarchTUE/ and marchforscience.com

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Genomics of rapid Evolution in Novel Environments network

Today, on Charles Darwin’s 208th birthday, we announce the launch of GrENE-net

Today, on Charles Darwin’s 208th birthday, we announce the launch of GrENE-net. A coordinated distributed global evolution experiment to study the Genomics of rapid Evolution in Novel Environments, … Read the rest

PhD opening to work on grain amaranths

Research Associate (TV-L E13 65%)
Population and quantitative genomics of heterosis in cultivated Amaranth

The three species of grain amaranth are ancient crops whose grains have a high nutritional value. Their domestication history is characterized by hybridization and gene flow. … Read the rest

Offer to temporary bench or desk space

We are offering scientists temporary bench or desk space…

We are offering scientists temporary bench or desk space, library access and will help with finding accommodation for US-based scientists who are stranded abroad due to the White House Executive Order … Read the rest

Former postdoc Ove Nilsson elected to Royal Swedish Academy

Ove Nilsson – director of the UPSC and professor at the Swedish University of Agricultural SciencesRead the rest

Rules of epiallele switching

DNA sequence properties that predict susceptibility to epiallelic switching

Catoni, M., Griffiths, J., Becker, C., Zabet N. R., Bayon, C., Dapp, M., Liebermann-Lazarovich, M., Weigel, D., Paszkowski, J.

Transgenerationally heritable epialleles are defined by the stable propagation of alternative transcriptional … Read the rest

easyGWAS paper in Plant Cell

A Cloud-based Platform for Comparing the Results of Genome-wide Association Studies

Grimm, D. G., Roqueiro, D., Salomé, P. A., Kleeberger, S., Greshake, B., Zhu, W., Liu, C., Lippert, C., Stegle, O., Schölkopf, B., Weigel, D., and Borgwardt, K. M. 

The … Read the rest